Its a interesting one, as indeed you can kind of make out what could be doors in the area you have referenced to.
I think HR Gigers idea was the Vaginal Like Openings to be the Entrance, but Prometheus and then Alien Covenant showed us these must act as some kind of Exhaust/Ventilation System? And these are located actually at the rear of the Ships.

I have used the image above to show where it appears the main entrance is, and this fits with Dr Shaw running down that long corridor as she was trying to escape from the Juggernaught, this is far to long/large to be inside the Juggernaught (but so is the Egg Silo in the Derelict).
The thing we get with the entrance at the rear, which is actually the front is the position and how the crew of Prometheus progressed to the Pilot Chamber must mean there was no direct route to the Center from the entrance and the routes to the left/right of the Pilot Chamber, will lead around through the Cargo Holds and Join up at the entrance, which is a very odd design but appears to be the actual design of the ship.